MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Escherichia coli
19428wD4_HM13
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 110
bases: 5,033,648 bps
CDS: 4,645
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 79
misc RNA:
Total features: 4,735
Total number of protein coding genes annotated/found:
4,645
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5033|JADGMH010000011.1
SEQF5033_00165
Genome Viewer
NA
AA
2016/672
25366-23351
tRNA(Met) cytidine acetyltransferase TmcA
SEQF5033|JADGMH010000011.1
SEQF5033_00166
Genome Viewer
NA
AA
864/288
26244-25381
putative protein
SEQF5033|JADGMH010000011.1
SEQF5033_00167
Genome Viewer
NA
AA
714/238
27125-26412
Phosphoribosylaminoimidazole-succinocarboxamide synthase
SEQF5033|JADGMH010000011.1
SEQF5033_00168
Genome Viewer
NA
AA
231/77
27197-27427
hypothetical protein
SEQF5033|JADGMH010000011.1
SEQF5033_00169
Genome Viewer
NA
AA
1035/345
28372-27338
Outer membrane protein assembly factor BamC
SEQF5033|JADGMH010000011.1
SEQF5033_00170
Genome Viewer
NA
AA
879/293
29267-28389
4-hydroxy-tetrahydrodipicolinate synthase
SEQF5033|JADGMH010000011.1
SEQF5033_00171
Genome Viewer
NA
AA
573/191
29413-29985
Glycine cleavage system transcriptional repressor
SEQF5033|JADGMH010000011.1
SEQF5033_00172
Genome Viewer
NA
AA
471/157
29985-30455
Peroxiredoxin Bcp
SEQF5033|JADGMH010000011.1
SEQF5033_00173
Genome Viewer
NA
AA
1062/354
31615-30554
Putative transport protein YhhT
SEQF5033|JADGMH010000011.1
SEQF5033_00174
Genome Viewer
NA
AA
1464/488
31828-33291
Beta-barrel assembly-enhancing protease
SEQF5033|JADGMH010000011.1
SEQF5033_00175
Genome Viewer
NA
AA
360/120
33312-33671
putative protein YfgD
SEQF5033|JADGMH010000011.1
SEQF5033_00176
Genome Viewer
NA
AA
747/249
34555-33809
DnaA regulatory inactivator Hda
SEQF5033|JADGMH010000011.1
SEQF5033_00177
Genome Viewer
NA
AA
1290/430
35894-34605
Uracil permease
SEQF5033|JADGMH010000011.1
SEQF5033_00178
Genome Viewer
NA
AA
627/209
36606-35980
Uracil phosphoribosyltransferase
SEQF5033|JADGMH010000011.1
SEQF5033_00179
Genome Viewer
NA
AA
1038/346
36931-37968
Phosphoribosylformylglycinamidine cyclo-ligase
SEQF5033|JADGMH010000011.1
SEQF5033_00180
Genome Viewer
NA
AA
639/213
37968-38606
Phosphoribosylglycinamide formyltransferase
SEQF5033|JADGMH010000011.1
SEQF5033_00181
Genome Viewer
NA
AA
2067/689
38778-40844
Polyphosphate kinase
SEQF5033|JADGMH010000011.1
SEQF5033_00182
Genome Viewer
NA
AA
1542/514
40849-42390
Exopolyphosphatase
SEQF5033|JADGMH010000011.1
SEQF5033_00183
Genome Viewer
NA
AA
2244/748
44672-42429
Cyclic di-GMP phosphodiesterase PdeF
SEQF5033|JADGMH010000011.1
SEQF5033_00184
Genome Viewer
NA
AA
153/51
45006-44854
hypothetical protein
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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